Protein Alignment pb and ceh-5

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_492586.2
• Gene: ceh-5 / 191616
• WormBaseID: WBGene00000430
• Length: 134
• Species: Caenorhabditis elegans
• Alignment Length: 98
• Identity: 38/98 - (38%)
• Similarity: 56/98 - (57%)
• Gaps: 14/98 - (14%)

  Fly   176 KSSNNNNQGDNSITEFVPENGL--PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLT 238
            ||:|    |...:.|...:..|  |:|.||.:|:.||.:||:.|:.:.||....|.::|.||.|:
 Worm    15 KSAN----GSEKMLEIPAKLDLERPKRPRTVFTDEQLEKLEESFNTSGYLSGSTRAKLAESLGLS 75

  Fly   239 ERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLK 271
            :.||||||||||.|.|:        .|::|.:|
 Worm    76 DNQVKVWFQNRRTKQKK--------IDSRDPIK 100

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
ceh-5	NP_492586.2	Homeodomain	36..92	CDD:459649	27/55 (49%)