Protein Alignment pb and alr-1

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_509860.1
• Gene: alr-1 / 181302
• WormBaseID: WBGene00044330
• Length: 362
• Species: Caenorhabditis elegans
• Alignment Length: 323
• Identity: 77/323 - (23%)
• Similarity: 128/323 - (39%)
• Gaps: 67/323 - (20%)

  Fly   154 QTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENG--LPRRLRTAYTNTQLLELEKE 216
            :||.| |::.|...:.:.:.:...|:..|..|        :||  ..||.||.::..||.||||.
 Worm    80 KTPTG-DNILEAASVLDNRENGSPSDGTNSPD--------DNGKRKQRRYRTTFSAFQLDELEKV 135

  Fly   217 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNS 281
            |....|.....|.|:|..:.|||.:|:|||||||.|:::|..|.|......       ..|..||
 Worm   136 FARTHYPDVFTREELATRVQLTEARVQVWFQNRRAKYRKQERSSTHHPYQA-------PMSIPNS 193

  Fly   282 NSKKSCQ----------------GCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSL 330
            |.....|                ...|.::.:..:||:.|..:.:.|..|::.....::||....
 Worm   194 NGDNPYQMMLSQEAIFAAINQQAAAHLLNEQVRIATSDRRSQSPSVPVTTSSPILPTSVTPTFQN 258

  Fly   331 ETGISSNLMGSTTVSA--------SNVISA-DSSVASSVSLDEDIEESSPIKVKKKDDGQVIKKE 386
            ...::....|.|.|:.        |..:.| .:.:..||......|.:..:.:|.:|.
 Worm   259 ADALNMLFGGITPVTQQLLYVQQFSRAMDAFRTQLLGSVPAGATAEVTDVVALKTEDS------- 316

  Fly   387 AVSTSSKASPFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANAIATPTPLSDSN 449
              .::|:|   |..:.||:     ..|.|:|...:||:       |....:.|:...|..:|:
 Worm   317 --KSNSRA---GSSSPTPT-----ESSGAAATSTSPTN-------FADMNSLISDVKPKEESS 362

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
alr-1	NP_509860.1	Homeodomain	118..174	CDD:459649	27/55 (49%)