Protein Alignment pb and unc-30

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001021277.1
• Gene: unc-30 / 178265
• WormBaseID: WBGene00006766
• Length: 323
• Species: Caenorhabditis elegans
• Alignment Length: 353
• Identity: 82/353 - (23%)
• Similarity: 114/353 - (32%)
• Gaps: 124/353 - (35%)

  Fly   152 VPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENG--------LPRRLRTAYTNT 208
            :|..|  .|...:.|.::......|...::|..|.|.......||        .|||.||.:|:.
 Worm    60 IPLPP--TDITTKLPKLELLSLDVKQEQDDNHLDTSSPTDSTGNGSTNGGKIQKPRRQRTHFTSH 122

  Fly   209 QLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGD 273
            ||.|||..|..|:|.....|.|||..:.|||.:|:|||:|||.|.:::..:...|
 Worm   123 QLTELENWFSRNRYPDMACREEIAVWISLTEPRVRVWFKNRRAKWRKRERNYVID---------- 177

  Fly   274 DDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNL 338
                                         |.:|....|         |.:|.|..||:......|
 Worm   178 -----------------------------NGQGTTKVT---------AQSLDPLGSLQNTFPQTL 204

  Fly   339 MGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVIKKEAVSTSS--------KAS 395
            :.|                ||..||:                     .||::||        :.:
 Worm   205 LQS----------------SSSQLDD---------------------SAVTSSSFYGYGGAWQQN 232

  Fly   396 PFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANAIATPT----------------P 444
            |:...|:..:.....:..|.......|.|......||.:|||....||                .
 Worm   233 PYYSRNNQTTFNWQIKPQDQFQFQTIPMSPTTATSRFSTAANLAPLPTAQAAFSTSATSSNDKLK 297

  Fly   445 LSD--SNSGNGSGGGPAGGYFPGYYPSP 470
            |.|  |||.:.|.|.|   |.|..|..|
 Worm   298 LMDGLSNSLSSSLGQP---YQPCQYSGP 322

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	28/55 (51%)
unc-30	NP_001021277.1	Homeodomain	113..169	CDD:459649	28/55 (51%)