Protein Alignment pb and unc-4

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_496138.1
• Gene: unc-4 / 174544
• WormBaseID: WBGene00006744
• Length: 252
• Species: Caenorhabditis elegans
• Alignment Length: 240
• Identity: 60/240 - (25%)
• Similarity: 92/240 - (38%)
• Gaps: 67/240 - (27%)

  Fly   169 KEKKTSRKSSN---NNNQG-----DNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCR 225
            :|:.||....|   |.:.|     ||...|...:.   ||.||.::..||.|||..|..:.|...
 Worm    54 REQSTSPDDDNLLMNEDDGIALEDDNDTGESAAKR---RRTRTNFSGWQLEELESAFEASHYPDV 115

  Fly   226 PRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGC 290
            ..|..:|..|||.|.:|:|||||||.|.:::..::....:.|   |.|.:|.::.:
 Worm   116 FMREALAMRLDLLESRVQVWFQNRRAKWRKREQNRNGSSEIK---KDDGEQMETKA--------- 168

  Fly   291 ELPS-----DDIPDSTSNSRGHNNN-----TPSATNNNPSAGNLTPNSSLETGISSNLMGSTTVS 345
             ||:     |.|...:...||...|     ..:..|.:|....|.|               .|..
 Worm   169 -LPTFPFSIDSILAVSRVPRGRRPNAKYPRVQACKNLSPFMIPLFP---------------ITQP 217

  Fly   346 ASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVIKKEAVST 390
            ..|||.               |:|.|:..::   .|::...|::|
 Worm   218 GGNVIR---------------EKSPPLPTQQ---SQIVATNALTT 244

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	26/55 (47%)
unc-4	NP_496138.1	Homeodomain	89..145	CDD:459649	26/55 (47%)