DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and NKX2-3

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_660328.2 Gene:NKX2-3 / 159296 HGNCID:7836 Length:364 Species:Homo sapiens


Alignment Length:129 Identity:42/129 - (32%)
Similarity:60/129 - (46%) Gaps:20/129 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   150 GVVPQ------------TPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLP---- 198
            |:.||            .|...:..||....:.:|:.:...:....||....|   |:..|    
Human    86 GLCPQGYVHTVLRDSCSEPKEHEEEPEVVRDRSQKSCQLKKSLETAGDCKAAE---ESERPKPRS 147

  Fly   199 -RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKT 261
             |:.|..::..|:.|||:.|...:||..|.|..:|:||.||..|||:||||||.|.|||...|:
Human   148 RRKPRVLFSQAQVFELERRFKQQRYLSAPEREHLASSLKLTSTQVKIWFQNRRYKCKRQRQDKS 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 26/55 (47%)
NKX2-3NP_660328.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..153 6/23 (26%)
Homeodomain 149..205 CDD:459649 26/55 (47%)

Return to query results.
Submit another query.