Protein Alignment pb and Hoxd9

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_038583.1
• Gene: Hoxd9 / 15438
• MGIID: 96210
• Length: 339
• Species: Mus musculus
• Alignment Length: 277
• Identity: 88/277 - (31%)
• Similarity: 112/277 - (40%)
• Gaps: 72/277 - (25%)

  Fly    28 VQTGQTSLP--VGGCGGAGVVGGVGGVG----VSVGQPGIG-------QQGVPPVPSVLMVNK-- 77
            |::....||  .||.||.|..||.||.|    .|.|.|..|       :.|..|.|:....:.
Mouse   104 VRSWMEPLPGFPGGAGGGGGSGGGGGGGPGPVPSPGGPANGRHYGIKPETGAAPAPAAASTSSSS 168

  Fly    78 --MTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESP-------KIGTPVGSGAIGGV 133
              .:.:..||:..:|...:...||                ||.|       |.....|:|.
Mouse   169 STSSSSSSKRTECSAARESQGSGG----------------PEFPCNSFLRDKAAAATGNGP---- 213

  Fly   134 GVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPW--MKEKKTS-----RKSSNNNNQGDNSITEF 191
                  .||:|.| |..|....|......|. |.  :||::..     ::..:.||...|.|
Mouse   214 ------GVGIGTG-PGAVGSSEPSACSDHPS-PGCSLKEEEKQPPQPPQQQLDPNNPAANWI--- 267

  Fly   192 VPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 256
              .....|:.|..||..|.|||||||.||.||.|.||.|:|..|:|||||||:||||||||.|:.
Mouse   268 --HARSTRKKRCPYTKYQTLELEKEFLFNMYLTRDRRYEVARILNLTERQVKIWFQNRRMKMKKM 330

  Fly   257 TLSKTDDEDNKDSLKGD 273
            :..|..        |||
Mouse   331 SKEKCP--------KGD 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	37/55 (67%)
Hoxd9	NP_038583.1	Hox9_act	1..>153	CDD:461369	17/48 (35%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	114..198		25/99 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	211..263		14/63 (22%)
		Homeodomain	273..324	CDD:459649	33/50 (66%)