Protein Alignment pb and Hoxd4

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_034599.2
• Gene: Hoxd4 / 15436
• MGIID: 96208
• Length: 250
• Species: Mus musculus
• Alignment Length: 272
• Identity: 85/272 - (31%)
• Similarity: 102/272 - (37%)
• Gaps: 106/272 - (38%)

  Fly    36 PVGGCGGAGVVGGV---------GGVGVSVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAY 91
            |.|| ||.|....:         .|.|...|.||......||.|
Mouse    61 PFGG-GGPGPGSALPARGHGQEPSGPGSHYGAPGERCPAPPPAP--------------------- 103

  Fly    92 WMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTP 156
                ..|....|||:        .|:.|..||.:...|:
Mouse   104 ----LPGARACSQPT--------GPKQPPPGTALKQPAV-------------------------- 130

  Fly   157 DGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNK 221
                   .||||  ||....|.|.|..|           |.|:|.|||||..|:||||||||||:
Mouse   131 -------VYPWM--KKVHVNSVNPNYTG-----------GEPKRSRTAYTRQQVLELEKEFHFNR 175

  Fly   222 YLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNK-DSLKGDDDQSDSNSNSKK 285
            ||.|.||||||.:|.|:|||:|:||||||||.|:         |:| .:.||       .|:|..
Mouse   176 YLTRRRRIEIAHTLCLSERQIKIWFQNRRMKWKK---------DHKLPNTKG-------RSSSSS 224

  Fly   286 SCQGCELPSDDI 297
            ||.....|...:
Mouse   225 SCSSSAAPGQHL 236

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	40/55 (73%)
Hoxd4	NP_034599.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	31..126		22/98 (22%)
		Antp-type hexapeptide	131..136		4/6 (67%)
		Homeodomain	153..209	CDD:459649	40/55 (73%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	210..250		9/34 (26%)