DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Hoxb7

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_034590.2 Gene:Hoxb7 / 15415 MGIID:96188 Length:217 Species:Mus musculus


Alignment Length:197 Identity:62/197 - (31%)
Similarity:82/197 - (41%) Gaps:61/197 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SPESPKI-GTPVGSGAIGGVGVNVNVNVGV-GVGYPV-----------------GVVPQTPDGMD 160
            :|.|..: |...|.||:.|...     .|| ..||.:                 ||.|..|....
Mouse    49 APFSASVQGLYSGGGAMAGQSA-----AGVYAAGYGLEPSSFNMHCAPFEQNLSGVCPGDPAKAA 108

  Fly   161 SVPE--------------YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLL 211
            ...|              ||||:.....||                       |.|..||..|.|
Mouse   109 GAKEQRDSDLAAESNFRIYPWMRSSGPDRK-----------------------RGRQTYTRYQTL 150

  Fly   212 ELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQ 276
            |||||||:|:||.|.||||||.:|.|||||:|:||||||||.|::..:.......:|..:.::::
Mouse   151 ELEKEFHYNRYLTRRRRIEIAHTLCLTERQIKIWFQNRRMKWKKENKTSGPGTTGQDKAEAEEEE 215

  Fly   277 SD 278
            .:
Mouse   216 EE 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 38/55 (69%)
Hoxb7NP_034590.2 Antp-type hexapeptide 126..131 3/4 (75%)
Homeodomain 138..194 CDD:459649 39/78 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 192..217 2/24 (8%)

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