DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and Hoxb5

DIOPT Version :9

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_032294.2 Gene:Hoxb5 / 15413 MGIID:96186 Length:269 Species:Mus musculus


Alignment Length:121 Identity:53/121 - (43%)
Similarity:68/121 - (56%) Gaps:28/121 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 PVGVVPQTPDGMDSVPE-YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLL 211
            |:......|:|  ..|: :|||::...|...:.             |:.   :|.|||||..|.|
Mouse   161 PMATSTAAPEG--QTPQIFPWMRKLHISHDMTG-------------PDG---KRARTAYTRYQTL 207

  Fly   212 ELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNK 267
            |||||||||:||.|.||||||.:|.|:|||:|:||||||||.|:         |||
Mouse   208 ELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK---------DNK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 COG5576 168..274 CDD:227863 47/100 (47%)
Homeobox 202..254 CDD:278475 39/51 (76%)
Hoxb5NP_032294.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 75..173 3/13 (23%)
Antp-type hexapeptide 176..181 2/4 (50%)
Homeobox 198..251 CDD:365835 39/52 (75%)
PRK07003 <67..>171 CDD:235906 2/9 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

Return to query results.
Submit another query.