Protein Alignment pb and Hoxb1

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_006532343.1
• Gene: Hoxb1 / 15407
• MGIID: 96182
• Length: 330
• Species: Mus musculus
• Alignment Length: 359
• Identity: 103/359 - (28%)
• Similarity: 131/359 - (36%)
• Gaps: 121/359 - (33%)

  Fly    33 TSLP------VGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVPSVLMVNKMTP--------NCD 83
            ||.|      |....|....|  ||:..|..|...|.....| ||.|.|:..:|        .|:
Mouse    26 TSFPPCSAPAVDSYAGESRYG--GGLPSSALQQNSGYPVQQP-PSSLGVSFPSPAPSGYAPAACN 87

  Fly    84 KRSADTAYWMTA-SEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGY 147
            .....:.|:... |||......||        |..:...|.|...|| ||||..         .|
Mouse    88 PSYGPSQYYSVGQSEGDGSYFHPS--------SYGAQLGGLPDSYGA-GGVGSG---------PY 134

  Fly   148 PVGVVPQTPDGMD---------------------SVPE------YPWMKEK----KTSRKSSNNN 181
            |   .||.|.|.:                     |.|.      :.|||.|    ||.|...::.
Mouse   135 P---PPQPPYGTEQTATFASAYDLLSEDKESPCSSEPSTLTPRTFDWMKVKRNPPKTGRAQRSHF 196

  Fly   182 NQGDNSITEFVPENGL--------------------PRRLRTAYTNTQLLELEKEFHFNKYLCRP 226
            .....:.|| .||.||                    |..|||.:|..||.||||||||||||.|.
Mouse   197 LSLARAYTE-GPEPGLHSFLQLLLLAAKVSELGLGAPGGLRTNFTTRQLTELEKEFHFNKYLSRA 260

  Fly   227 RRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCE 291
            ||:||||:|:|.|.|||:||||||||.|                             |:..:|..
Mouse   261 RRVEIAATLELNETQVKIWFQNRRMKQK-----------------------------KREREGGR 296

  Fly   292 LPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLT 325
            :|:.. |.....:.|..::..:.|:...|..::|
Mouse   297 MPAGP-PGCPKEAAGDASDQSACTSPEASPSSIT 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	39/55 (71%)
Hoxb1	XP_006532343.1	Homeodomain	236..289	CDD:459649	39/81 (48%)