Protein Alignment pb and Hoxa6

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_034584.1
• Gene: Hoxa6 / 15403
• MGIID: 96178
• Length: 232
• Species: Mus musculus
• Alignment Length: 265
• Identity: 82/265 - (30%)
• Similarity: 108/265 - (40%)
• Gaps: 81/265 - (30%)

  Fly    23 LNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVPSVLMVNKMT----PNCD 83
            |.|.....|.:|||                ..:...|...||.    .|||..|:.:    .:|.
Mouse    35 LRPFPASYGASSLP----------------DKTYTSPCFYQQS----NSVLACNRASYEYGASCF 79

  Fly    84 KRSADTAYWMTASEGGFINSQPSMAEFLNHLSPE---SPKIGTPVGSGAIGGVGVNVNVNVGVGV 145
            ....|.:   .||..| .|.|....::| |.|||   .|       .|::.|..::
Mouse    80 YSDKDLS---GASPSG-NNKQRGPGDYL-HFSPEQQYKP-------DGSVQGKALH--------- 123

  Fly   146 GYPVGVVPQTPDGMD---SVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTN 207
                      .:|.|   :.|.|||| ::..|...:...:.|              ||.|..||.
Mouse   124 ----------EEGTDRKYTSPVYPWM-QRMNSCAGAVYGSHG--------------RRGRQTYTR 163

  Fly   208 TQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKG 272
            .|.||||||||||:||.|.||||||.:|.|||||:|:||||||||.|     |.:...|.....|
Mouse   164 YQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWK-----KENKLINSTQASG 223

  Fly   273 DDDQS 277
            :|.::
Mouse   224 EDSEA 228

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	40/55 (73%)
Hoxa6	NP_034584.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	88..126		13/65 (20%)
		Antp-type hexapeptide	135..140		4/5 (80%)
		Homeodomain	155..211	CDD:459649	41/60 (68%)