Protein Alignment pb and Hoxa1

DIOPT Version :9

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_034579.3
• Gene: Hoxa1 / 15394
• MGIID: 96170
• Length: 336
• Species: Mus musculus
• Alignment Length: 351
• Identity: 98/351 - (27%)
• Similarity: 131/351 - (37%)
• Gaps: 113/351 - (32%)

  Fly     5 CSSLDTTSMGTQIKSESP---------LNPLQVQTGQTSLPVG------GCGGAGVVGGVGGVGV 54
            |...|...:|..::..||         .:| |..|.|||..:|      .||.:   .|......
Mouse    47 CGGDDRFLVGRGVQISSPHHHHHHHHHHHP-QTATYQTSGNLGISYSHSSCGPS---YGAQNFSA 107

  Fly    55 SVGQPGIGQQ-----GVPP-VPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQP-------- 105
            ..|..|:.|:     |.|| .|:|...|..||..........|     .||.:.|..
Mouse   108 PYGPYGLNQEADVSGGYPPCAPAVYSGNLSTPMVQHHHHHQGY-----AGGTVGSPQYIHHSYGQ 167

  Fly   106 -----SMAEFLNHLSP---------ESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTP 156
                 ::|.:.|.|||         .||  .:...|.|                        ||
Mouse   168 EQQTLALATYNNSLSPLHASHQEACRSP--ASETSSPA------------------------QT- 205

  Fly   157 DGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNK 221
                    :.|||.|:...|:......|      :|   |.|..:||.:|..||.||||||||||
Mouse   206 --------FDWMKVKRNPPKTGKVGEYG------YV---GQPNAVRTNFTTKQLTELEKEFHFNK 253

  Fly   222 YLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSL--------KGDDDQSD 278
            ||.|.||:||||||.|.|.|||:||||||||.|::         .|:.|        .|.|::::
Mouse   254 YLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKR---------EKEGLLPISPATPPGSDEKTE 309

  Fly   279 SNSNSKKSCQGCELPSDDIPDSTSNS 304
            .:|...........|:....|:.:.|
Mouse   310 ESSEKSSPSPSAPSPASSTSDTLTTS 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	COG5576	168..274	CDD:227863	51/113 (45%)
		Homeobox	202..254	CDD:278475	39/51 (76%)
Hoxa1	NP_034579.3	COG5576	177..>287	CDD:227863	58/153 (38%)
		Homeobox	234..287	CDD:365835	39/52 (75%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810