DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Mnx1

DIOPT Version :9

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_064328.2 Gene:Mnx1 / 15285 MGIID:109160 Length:404 Species:Mus musculus


Alignment Length:478 Identity:119/478 - (24%)
Similarity:161/478 - (33%) Gaps:148/478 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSLDTTSMGTQIKSESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVP 70
            ||..|.:.|.::::|||..|..:......||..|..||      ||.|.:.|.||.......|  
Mouse    63 SSEATAAPGDRLRAESPSPPRLLAAHCALLPKPGFLGA------GGGGGAAGGPGTPHHHAHP-- 119

  Fly    71 SVLMVNKMTPNCDKRSADTAYWMTASEGGF-INSQPSMAEFLNHLSPESPKIGTPVGS-GAIGGV 133
                        ...:|..|....|:.||. :...|..|:....|..::...|.||.| .|....
Mouse   120 ------------GAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYSYSAAAAA 172

  Fly   134 GVNVNVNVGVGVGYP--VGVVPQTPD-----GMDSVPEYPWMKEKKTSR---KSSNNNNQGDNSI 188
            ......:..:...||  .|..|..|.     |..:.....|::......   |..:.::|..:::
Mouse   173 AALAGQHPALSYSYPQVQGAHPAHPADPIKLGASTFQLDQWLRASTAGMILPKMPDFSSQAQSNL 237

  Fly   189 TEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 253
            .      |..||.|||:|:.||||||.:|..||||.||:|.|:|.||.|||.|||:||||||||.
Mouse   238 L------GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKW 296

  Fly   254 KRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNN 318
            ||...:|.......:..||                                              
Mouse   297 KRSKKAKEQAAQEAEKQKG---------------------------------------------- 315

  Fly   319 PSAGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVI 383
              .|..|.....|......|||..       :|.|.  ||...| .|:.:|.|      |:    
Mouse   316 --GGGGTGKGGSEEKTEEELMGPP-------VSGDK--ASGRRL-RDLRDSDP------DE---- 358

  Fly   384 KKEAVSTSSKASPFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANAIATPTPLSDS 448
                                        |.|.....|.|.|...|       |:|.:     ||.
Mouse   359 ----------------------------DEDDEEEDNFPYSNGAG-------AHAAS-----SDC 383

  Fly   449 NSGNGSGGGPAGGYFPGYYPSPK 471
            :|.:.|.....||  ||:.|.|:
Mouse   384 SSEDDSPPPRLGG--PGHQPLPQ 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 COG5576 168..274 CDD:227863 46/108 (43%)
Homeobox 202..254 CDD:278475 36/51 (71%)
Mnx1NP_064328.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..80 6/16 (38%)
Homeobox 244..297 CDD:278475 36/52 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 299..404 35/214 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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