DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Mnx1

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_064328.2 Gene:Mnx1 / 15285 MGIID:109160 Length:404 Species:Mus musculus


Alignment Length:478 Identity:119/478 - (24%)
Similarity:161/478 - (33%) Gaps:148/478 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 SSLDTTSMGTQIKSESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVP 70
            ||..|.:.|.::::|||..|..:......||..|..||      ||.|.:.|.||.......|  
Mouse    63 SSEATAAPGDRLRAESPSPPRLLAAHCALLPKPGFLGA------GGGGGAAGGPGTPHHHAHP-- 119

  Fly    71 SVLMVNKMTPNCDKRSADTAYWMTASEGGF-INSQPSMAEFLNHLSPESPKIGTPVGS-GAIGGV 133
                        ...:|..|....|:.||. :...|..|:....|..::...|.||.| .|....
Mouse   120 ------------GAAAAAAAAAAAAAAGGLALGLHPGGAQGGAGLPAQAALYGHPVYSYSAAAAA 172

  Fly   134 GVNVNVNVGVGVGYP--VGVVPQTPD-----GMDSVPEYPWMKEKKTSR---KSSNNNNQGDNSI 188
            ......:..:...||  .|..|..|.     |..:.....|::......   |..:.::|..:::
Mouse   173 AALAGQHPALSYSYPQVQGAHPAHPADPIKLGASTFQLDQWLRASTAGMILPKMPDFSSQAQSNL 237

  Fly   189 TEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 253
            .      |..||.|||:|:.||||||.:|..||||.||:|.|:|.||.|||.|||:||||||||.
Mouse   238 L------GKCRRPRTAFTSQQLLELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKW 296

  Fly   254 KRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNN 318
            ||...:|.......:..||                                              
Mouse   297 KRSKKAKEQAAQEAEKQKG---------------------------------------------- 315

  Fly   319 PSAGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVI 383
              .|..|.....|......|||..       :|.|.  ||...| .|:.:|.|      |:    
Mouse   316 --GGGGTGKGGSEEKTEEELMGPP-------VSGDK--ASGRRL-RDLRDSDP------DE---- 358

  Fly   384 KKEAVSTSSKASPFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANAIATPTPLSDS 448
                                        |.|.....|.|.|...|       |:|.:     ||.
Mouse   359 ----------------------------DEDDEEEDNFPYSNGAG-------AHAAS-----SDC 383

  Fly   449 NSGNGSGGGPAGGYFPGYYPSPK 471
            :|.:.|.....||  ||:.|.|:
Mouse   384 SSEDDSPPPRLGG--PGHQPLPQ 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 38/55 (69%)
Mnx1NP_064328.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 36..80 6/16 (38%)
Homeodomain 242..298 CDD:459649 38/55 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 299..404 35/214 (16%)

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