DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Emx2

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_034262.2 Gene:Emx2 / 13797 MGIID:95388 Length:253 Species:Mus musculus


Alignment Length:259 Identity:75/259 - (28%)
Similarity:107/259 - (41%) Gaps:56/259 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 MVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIG---TPVGSGAIG-GVG 134
            :|.|.:|....||.|..             :|:...:.|. ||.:|.:.   :...:.|.| ||.
Mouse    15 LVAKDSPLPASRSEDPI-------------RPAALSYANS-SPINPFLNGFHSAAAAAAAGRGVY 65

  Fly   135 VNVNVNVGVGVGYP----VGVVPQTP---------------------DGMDSVPEYPWMKEKKTS 174
            .|.::.....|.:|    |.|.|..|                     ...|....|||:..:  .
Mouse    66 SNPDLVFAEAVSHPPNPAVPVHPVPPPHALAAHPLPSSHSPHPLFASQQRDPSTFYPWLIHR--Y 128

  Fly   175 RKSSNNNNQGDNSITEFVPENGL---PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLD 236
            |...:.....|.|...|:..|.|   |:|:|||::.:|||.||..|..|.|:....|.::|.||.
Mouse   129 RYLGHRFQGNDTSPESFLLHNALARKPKRIRTAFSPSQLLRLEHAFEKNHYVVGAERKQLAHSLS 193

  Fly   237 LTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSN----SNSKKSCQGCELPSDD 296
            |||.||||||||||.|.|||.|    :|:..||.:........|    :..:.|.:..::.|||
Mouse   194 LTETQVKVWFQNRRTKFKRQKL----EEEGSDSQQKKKGTHHINRWRIATKQASPEEIDVTSDD 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 30/55 (55%)
Emx2NP_034262.2 Homeodomain 156..212 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 213..253 8/43 (19%)

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