DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and NKX2-6

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001129743.2 Gene:NKX2-6 / 137814 HGNCID:32940 Length:301 Species:Homo sapiens


Alignment Length:120 Identity:40/120 - (33%)
Similarity:57/120 - (47%) Gaps:18/120 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 GVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYT 206
            |:....|:|       |...|||          |...|:.:......:| .|:....|:.|..::
Human    94 GLNAASPLG-------GGTRVPE----------RGVGNSGDSVRGGRSE-QPKARQRRKPRVLFS 140

  Fly   207 NTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKT 261
            ..|:|.||:.|...:||..|.|..:|::|.||..|||:||||||.|.|||...|:
Human   141 QAQVLALERRFKQQRYLSAPEREHLASALQLTSTQVKIWFQNRRYKCKRQRQDKS 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 25/55 (45%)
NKX2-6NP_001129743.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..135 12/58 (21%)
Homeodomain 133..189 CDD:459649 25/55 (45%)

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