DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Dlx6

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_034187.1 Gene:Dlx6 / 13396 MGIID:101927 Length:297 Species:Mus musculus


Alignment Length:176 Identity:53/176 - (30%)
Similarity:79/176 - (44%) Gaps:29/176 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 SVPEYPWMKEKKTS-------RKSSNNNNQGDNSITE--FVPENG---------LPRRLRTAYTN 207
            |:..||:|...:.|       ..|:....:||::..:  .|.|||         ..|:.||.|::
Mouse   116 SLAAYPYMSHSQHSPYLQSYHNSSAAAQTRGDDTDQQKTTVIENGEIRFNGKGKKIRKPRTIYSS 180

  Fly   208 TQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKG 272
            .||..|...|...:||..|.|.|:||||.||:.|||:||||:|.|.|: .|.:..:....|.|.|
Mouse   181 LQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKK-LLKQGSNPHESDPLPG 244

  Fly   273 DDDQSDSNS------NSKKSCQGCELPSDDIPDSTSNSRGHNNNTP 312
            ....|..:.      :...|.:|..:|    |:|......|..::|
Mouse   245 SAALSPRSPALPPVWDVSASAKGVSMP----PNSYMPGYSHWYSSP 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 28/55 (51%)
Dlx6NP_034187.1 COG5576 123..279 CDD:227863 48/160 (30%)
Homeodomain 172..228 CDD:459649 28/55 (51%)

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