DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Dlx4

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_031893.3 Gene:Dlx4 / 13394 MGIID:94904 Length:240 Species:Mus musculus


Alignment Length:211 Identity:54/211 - (25%)
Similarity:88/211 - (41%) Gaps:56/211 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 VGVGVGYPVGVVPQT---PD---------------------GMDSVP----------------EY 165
            :.|...||:|:.|.|   ||                     |...:|                |:
Mouse    25 LSVVAAYPLGLSPGTAASPDLSYSQSYGHPRSYSHPGPATPGDSYLPRQQQLVAPSQPFHRPAEH 89

  Fly   166 PWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIE 230
            |...|.::.:.:.:.......|:|..:      |:.||.|::.||..|.:.|...:||..|.|.:
Mouse    90 PQELEAESEKLALSLVPSQQQSLTRKL------RKPRTIYSSLQLQHLNQRFQHTQYLALPERAQ 148

  Fly   231 IAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELP-S 294
            :||.|.||:.|||:||||:|.|:|:  |.|....:.::...|.......:|.:.....|  || :
Mouse   149 LAAQLGLTQTQVKIWFQNKRSKYKK--LLKQSSGEPEEDFSGRPPSLSPHSPALPFIWG--LPKA 209

  Fly   295 DDIPDSTSNSRGHNNN 310
            |.:|.|     |::|:
Mouse   210 DTLPSS-----GYDNS 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 26/55 (47%)
Dlx4NP_031893.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 44..70 2/25 (8%)
Homeodomain 117..173 CDD:459649 26/55 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 175..194 2/18 (11%)

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