DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and Dlx1

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_034183.1 Gene:Dlx1 / 13390 MGIID:94901 Length:255 Species:Mus musculus


Alignment Length:192 Identity:59/192 - (30%)
Similarity:88/192 - (45%) Gaps:31/192 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 VGYP----VGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITE--FVPENGLPRRL-- 201
            :|||    |.....:| .:.||..||.......||......:...:::.|  .|..||..:::  
Mouse    67 LGYPYVNSVSSHASSP-YISSVQSYPGSASLAQSRLEDPGADSEKSTVVEGGEVRFNGKGKKIRK 130

  Fly   202 -RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDED 265
             ||.|::.||..|.:.|...:||..|.|.|:||||.||:.|||:||||:|.|.|:  |.|    .
Mouse   131 PRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKK--LMK----Q 189

  Fly   266 NKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPN 327
            ...:|:|     .:.:|.:....|    |..:|.      |.|.|:.|...:..|||:..|:
Mouse   190 GGAALEG-----SALANGRALSAG----SPPVPP------GWNPNSSSGKGSGSSAGSYVPS 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 27/58 (47%)
Dlx1NP_034183.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 95..118 3/22 (14%)
Homeodomain 129..185 CDD:459649 27/55 (49%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..233 10/38 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.