DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and slou

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_061507570.1 Gene:slou / 1271755 VectorBaseID:AGAMI1_009597 Length:731 Species:Anopheles gambiae


Alignment Length:251 Identity:69/251 - (27%)
Similarity:104/251 - (41%) Gaps:49/251 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 ESPLNPLQVQTGQTSLPVGGCGGA--GVVGGVGGV---GVSVGQPGI-GQQG--VPPVPSVLMVN 76
            |:.|:|.:....|.....||.|||  .:.||:.|.   |..:|.|.: |..|  .....:...||
Mosquito   459 ENILDPNKFNGKQHCASGGGGGGAVTPISGGIFGPKLNGTKLGGPALNGAAGGNYATNNNNCTVN 523

  Fly    77 KMTPNCDKRSA-----DTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVN 136
            ....|.:..::     :..:|   |:.|.:.....:.:  :|....|.|                
Mosquito   524 NNNNNNNNNNSINHNNNAKFW---SQSGGLERDDKLDD--DHSDSRSVK---------------- 567

  Fly   137 VNVNVGVGVGYPVGVVPQTPDGMDSV-PEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRR 200
                       .|..:.|...|.|:: .:......:..|:|..:||..||.   :....:..|||
Mosquito   568 -----------DVNDIDQDDMGDDTMGSDMDDHASETDSKKDGSNNRSGDG---KSQGNSSKPRR 618

  Fly   201 LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 256
            .|||:|..||:.||.:|...:||....|:.:|.||.|||.|||:||||||.|.|:|
Mosquito   619 ARTAFTYEQLVSLENKFKTTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKKQ 674

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 30/55 (55%)
slouXP_061507570.1 None

Return to query results.
Submit another query.