DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and unpg

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_308835.5 Gene:unpg / 1270160 VectorBaseID:AGAMI1_008945 Length:588 Species:Anopheles gambiae


Alignment Length:493 Identity:114/493 - (23%)
Similarity:164/493 - (33%) Gaps:177/493 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 GGV---GGVGVSVGQPGIGQQGVPPV-PSVLMVNKMTPNCDKRSADTAYWMTASEGGFIN----- 102
            ||:   .|...:..||..|..||.|. ||       :|. ..||.|..:   .:|...::     
Mosquito   160 GGIEPCPGTYPAAEQPQSGGGGVLPTRPS-------SPR-GARSGDKLF---PTEVDLLSKVYAV 213

  Fly   103 -----SQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTP-----D 157
                 .|....:...:|:|.||..|......|:...|    ||.|.|.| .:...||:|     .
Mosquito   214 YHHQQQQQQQQQQPRYLTPSSPGTGYTTTGAALEPNG----VNPGTGNG-QLHHQPQSPGETIDP 273

  Fly   158 GMDSVPE-----YPWMKEKKTSRKSS------------------------------------NNN 181
            |.|..||     .|.:::...|...|                                    |::
Mosquito   274 GSDGGPEDEERTRPTIEDGGESADGSAYSDDISLTLSPSGCGKTTDLGDSDSDACSEDDCTQNSS 338

  Fly   182 NQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWF 246
            :.|....:....||...||.|||:|:.||||||:|||..|||....|.:||.||.|:|.|||:||
Mosquito   339 SSGRAGKSGSGAENSKSRRRRTAFTSEQLLELEREFHAKKYLSLTERSQIATSLKLSEVQVKIWF 403

  Fly   247 QNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNT 311
            ||||.|.||.          |..|                              .|:..|:.|.:
Mosquito   404 QNRRAKWKRV----------KAGL------------------------------NSHGLGNRNAS 428

  Fly   312 PSATNNNPSAGNL--------------TPNSSLETGISSNLMGSTTVSASNVISADSSVASS--- 359
            .|.|....:|..:              :.:..:|   ..||:|    ..:.:..||..:|.|   
Mosquito   429 GSGTGTTGTANKIVVPIPVHVNRFAIRSQHQQME---KMNLVG----PKAELRKADLGLAESGGF 486

  Fly   360 --VSLDEDIEESSPIKVKKKDDGQVIKKEAVSTSSKASPFGYENSTPSLVSFRRDSDASAVGNAP 422
              ..|::.:.:..|              .|..||::..|                    |....|
Mosquito   487 ERFGLNKHLSKVVP--------------SAEVTSNRVDP--------------------AFSAGP 517

  Fly   423 TSKAVGKKRFQSAANAIATPTPLSDSNSGNGSGGGPAG 460
            |.:|..... :.|:|:....:......:|.|.|.|.||
Mosquito   518 TLQAAPAPS-EGASNSSIESSVTGGGGAGGGGGAGTAG 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 35/55 (64%)
unpgXP_308835.5 None

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