DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Barx1

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_031552.2 Gene:Barx1 / 12022 MGIID:103124 Length:254 Species:Mus musculus


Alignment Length:289 Identity:76/289 - (26%)
Similarity:108/289 - (37%) Gaps:64/289 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GQPGIGQQGVPP---------VPSVLMVNKMT-PNCDKRSADTAYWMTASEGGFINSQPSMA--E 109
            |:||..:.|.|.         ..|.::...:| |...|.:|..|....|.|......|..:|  .
Mouse     5 GEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFGVQALLAARP 69

  Fly   110 FLNHLS---PESPKIG----TPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPW 167
            |.:||:   .|...:.    .|:|...:|      :..:..|.|.|      .|.|...:|....
Mouse    70 FHSHLAVLKAEQAAVFKFPLAPLGCSGLG------SALLAAGPGMP------GPAGASHLPLELQ 122

  Fly   168 MKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIA 232
            ::.|..:..|.....:....           ||.||.:|..||:.|||.|...|||..|.||::|
Mouse   123 LRGKLEAAGSGEPGAKAKKG-----------RRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLA 176

  Fly   233 ASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDI 297
            .||.|::.|||.|:||||||.|            |..|:|...:|.:....:..       .:.|
Mouse   177 ESLGLSQLQVKTWYQNRRMKWK------------KIVLQGGGLESPTKPKGRPK-------KNSI 222

  Fly   298 PDS---TSNSRGHNNNTPSATNNNPSAGN 323
            |.|   |...|......|:.|...||..|
Mouse   223 PTSEQLTEQERAKETEKPAETPGEPSDRN 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 31/55 (56%)
Barx1NP_031552.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 5/14 (36%)
Homeodomain 143..199 CDD:459649 32/67 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..254 12/55 (22%)

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