DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and Alx4

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_031468.1 Gene:Alx4 / 11695 MGIID:108359 Length:399 Species:Mus musculus


Alignment Length:437 Identity:95/437 - (21%)
Similarity:149/437 - (34%) Gaps:101/437 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EVCSSLDTTSMGTQIKSESPLNPLQVQTGQTSLPVGGCGG----------AGVVGGVGGVGVSVG 57
            |.|.|...:.........||::    |:.:.|.|..|..|          ||..|...|...|..
Mouse     4 ETCVSYCESPAAAMDAYYSPVS----QSREGSSPFRGFPGGDKFGTTFLSAGAKGQGFGDAKSRA 64

  Fly    58 QPGIGQQGV-PPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKI 121
            :.|.|||.: .|:.|                     .:.:.|.|...||.........:|.:|..
Mouse    65 RYGAGQQDLAAPLES---------------------SSGARGSFNKFQPQPPTPQPPPAPPAPPA 108

  Fly   122 GTPVGSGAI------------GGVGVNVNVNVGV-----GVGYPVGVVPQTPDGMDSVPEYPWMK 169
            ...:..||.            |..|.|..:.|..     .:|.|.......|.|||:    .::.
Mouse   109 HLYLQRGACKTPPDGSLKLQEGSGGHNAALQVPCYAKESNLGEPELPPDSEPVGMDN----SYLS 169

  Fly   170 EKKTSRKSSNNNNQGD----NSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIE 230
            .|:|..|...:....:    ...|:.....|..||.||.:|:.||.||||.|....|.....|.:
Mouse   170 VKETGAKGPQDRASAEIPSPLEKTDSESNKGKKRRNRTTFTSYQLEELEKVFQKTHYPDVYAREQ 234

  Fly   231 IAASLDLTERQVKVWFQNRRMK-HKRQTLSKTDD----------------EDNKDSLKGDDDQSD 278
            :|...||||.:|:|||||||.| .||:...:...                .:|...:     |:.
Mouse   235 LAMRTDLTEARVQVWFQNRRAKWRKRERFGQMQQVRTHFSTAYELPLLTRAENYAQI-----QNP 294

  Fly   279 S---NSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMG 340
            |   |:.:......|.:|.|.:|...|         |.|  :.|.:|..:.:..|....:.:.:|
Mouse   295 SWIGNNGAASPVPACVVPCDPVPACMS---------PHA--HPPGSGASSVSDFLSVSGAGSHVG 348

  Fly   341 STTV----SASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVI 383
            .|.:    .|:.:....:....:...|......:.:::|.|:....|
Mouse   349 QTHMGSLFGAAGISPGLNGYEMNGEPDRKTSSIAALRMKAKEHSAAI 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 28/56 (50%)
Alx4NP_031468.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..133 14/85 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 171..206 7/34 (21%)
Homeodomain 203..259 CDD:459649 28/55 (51%)
OAR 375..393 CDD:461067 3/17 (18%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 379..392 2/12 (17%)

Return to query results.
Submit another query.