DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Nkx2-5

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_446103.2 Gene:Nkx2-5 / 114109 RGDID:620520 Length:319 Species:Rattus norvegicus


Alignment Length:63 Identity:29/63 - (46%)
Similarity:40/63 - (63%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKT 261
            |:.|..::..|:.|||:.|...:||..|.|.::|:.|.||..|||:||||||.|.|||...:|
  Rat   138 RKPRVLFSQAQVYELERRFKQQRYLSAPERDQLASVLKLTSTQVKIWFQNRRYKCKRQRQDQT 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 25/55 (45%)
Nkx2-5NP_446103.2 Homeodomain 144..194 CDD:459649 23/49 (47%)

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