Protein Alignment pb and ATHB54

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001322131.1
• Gene: ATHB54 / 10723019
• AraportID: AT1G27045
• Length: 252
• Species: Arabidopsis thaliana
• Alignment Length: 97
• Identity: 35/97 - (36%)
• Similarity: 48/97 - (49%)
• Gaps: 7/97 - (7%)

  Fly   177 SSNNNNQGDNSITEFVPENGLPRRL--RTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTE 239
            ||..|.:......|.|.|:.:.|.:  :...|..||..||:.|...|.|...|::.:|..|.|..
plant    42 SSMINTETATMDEEDVCESYMMREITKKRKLTPIQLRLLEESFEEEKRLEPDRKLWLAEKLGLQP 106

  Fly   240 RQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLK 271
            .||.|||||||.::|.:.|     |.:.||||
plant   107 SQVAVWFQNRRARYKTKQL-----EHDCDSLK 133

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	22/57 (39%)
ATHB54	NP_001322131.1	HOX	68..121	CDD:197696	21/52 (40%)
		HALZ	123..161	CDD:460477	6/16 (38%)