Protein Alignment pb and hoxc6

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_004911991.1
• Gene: hoxc6 / 101733663
• XenbaseID: XB-GENE-478131
• Length: 242
• Species: Xenopus tropicalis
• Alignment Length: 131
• Identity: 57/131 - (43%)
• Similarity: 75/131 - (57%)
• Gaps: 13/131 - (9%)

  Fly   161 SVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCR 225
            |:..||||:...:......:::.|       |......||.|..|:..|.||||||||||:||.|
 Frog   119 SIQIYPWMQRMNSHSVCLVSDSLG-------VGYGADRRRGRQIYSRYQTLELEKEFHFNRYLTR 176

  Fly   226 PRRIEIAASLDLTERQVKVWFQNRRMKHKRQT-LSKTDDEDN---KDSLKGDDDQ--SDSNSNSK 284
            .||||||.:|.|||||:|:||||||||.|::: |:.|.....   .|||.||.::  .||....|
 Frog   177 RRRIEIANALCLTERQIKIWFQNRRMKWKKESNLTSTLSGGTGAAADSLAGDKEEKREDSEGQGK 241

  Fly   285 K 285
            :
 Frog   242 E 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	39/55 (71%)
hoxc6	XP_004911991.1	Homeodomain	150..206	CDD:459649	39/55 (71%)