Protein Alignment pb and hoxd13

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002935723.1
• Gene: hoxd13 / 100498102
• XenbaseID: XB-GENE-482320
• Length: 300
• Species: Xenopus tropicalis
• Alignment Length: 272
• Identity: 73/272 - (26%)
• Similarity: 105/272 - (38%)
• Gaps: 53/272 - (19%)

  Fly    12 SMGTQIKSESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVP--------- 67
            |...:...|.|..|  ..||    |.|...|.|...|.|.....:.. |:|.|..|
 Frog    59 SARAEATKEGPTCP--ASTG----PSGPSLGYGYHFGNGYYSCRMSH-GVGLQQNPLKSSSHASL 116

  Fly    68 ---PVPSVLMVNKM------TPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGT 123
               ||...:.|:.:      :.....|:.:.:|:.     |:.|....:..:|:.:|..|.  |.
 Frog   117 GGFPVEKYMDVSGLASTSVPSNEVSSRAKEVSYFQ-----GYTNPYQHVPGYLDMVSTFSS--GE 174

  Fly   124 PVGSGAIGGVGVN--VNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDN 186
            |.....|...|..  ...|...|..|       .|......|.: |        |||...:...|
 Frog   175 PRHEAYISMEGYQSWTLANGWNGQVY-------CPKDQSQAPHF-W--------KSSFPGDVALN 223

  Fly   187 SITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRM 251
            .....|...|  |:.|..||..||.|||.|:..||::.:.:|..|:|:.:|:||||.:||||||:
 Frog   224 QADMCVYRRG--RKKRVPYTKLQLKELENEYAVNKFINKDKRRRISAATNLSERQVTIWFQNRRV 286

  Fly   252 KHKRQTLSKTDD 263
            |.|: .:||..|
 Frog   287 KDKK-IVSKLKD 297

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
hoxd13	XP_002935723.1	HoxA13_N	10..143	CDD:463521	19/90 (21%)
		Homeodomain	234..290	CDD:459649	27/55 (49%)