Protein Alignment pb and dbx1

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002940015.1
• Gene: dbx1 / 100495433
• XenbaseID: XB-GENE-480177
• Length: 328
• Species: Xenopus tropicalis
• Alignment Length: 318
• Identity: 73/318 - (22%)
• Similarity: 106/318 - (33%)
• Gaps: 123/318 - (38%)

  Fly   148 PVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQ-----GDNSI------TEFVP-------- 193
            |..:.|.|.|...|:.|.|.:..::.....|:||:.     |.|:|      ||..|
 Frog    60 PPSMSPPTSDSPTSLSEVPDLARREAPTSISSNNSSTFLKFGVNAILSASPRTETCPALPPSVAP 124

  Fly   194 ----------------------------------------ENGLPRR---LRTAYTNTQLLELEK 215
                                                    ..|.|||   .|..:::.|...|||
 Frog   125 PKAFAFPYFEGSFQPFIRSSYFPASSSVVPIPGTFSWPLAARGKPRRGMLRRAVFSDVQRKALEK 189

  Fly   216 EFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSN 280
            .|...||:.:|.|.::|..|.|.:.|||:||||||||.:
 Frog   190 MFQKQKYISKPDRKKLAGKLGLKDSQVKIWFQNRRMKWR-------------------------- 228

  Fly   281 SNSKK----SCQGCE--------LPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETG 333
             |||:    |..||.        .|..|:.|....|.|.....|...:...|:....|..||.
 Frog   229 -NSKERELLSSGGCREQTLPTKFNPHPDLSDVGKKSSGEGEEEPMCNSPAHSSPYQCPEHSLR-- 290

  Fly   334 ISSNLMGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVIKKEAVSTS 391
            :.:.|..|         ..:||:||..|...|.||         ::|:  ::|.::.|
 Frog   291 LDAQLPPS---------PFNSSIASKPSDFSDSEE---------EEGE--QEEEITVS 328

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	26/58 (45%)
dbx1	XP_002940015.1	Homeodomain	175..229	CDD:459649	24/80 (30%)