Protein Alignment pb and hoxb8

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002938067.1
• Gene: hoxb8 / 100493882
• XenbaseID: XB-GENE-990961
• Length: 243
• Species: Xenopus tropicalis
• Alignment Length: 315
• Identity: 82/315 - (26%)
• Similarity: 113/315 - (35%)
• Gaps: 83/315 - (26%)

  Fly     6 SSLDTTSMGTQIKSESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGV--GVSVG----QPGIGQ- 63
            ||....|:.::.|:...|.|....          ||.|..:||...|  |.|.|    .||..|
 Frog     2 SSYFVNSLFSKYKTGDSLRPNYYD----------CGFAQDLGGRPTVVYGASAGGTFQHPGQIQD 56

  Fly    64 --QGVPPVPS-VLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPV 125
              .|.|.:.| ....|.....|.           ...|.|....|...:.|  .|.:..::
 Frog    57 FYHGTPSLSSPTYQQNPCAVTCH-----------GDPGSFYGYDPLQRQSL--FSSQDTEL---- 104

  Fly   126 GSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITE 190
                   |..:.......|:|.......|:|   .....:|||:.:..:.:
 Frog   105 -------VQYSECKLASAGLGEEAESSEQSP---SPTQLFPWMRPQAAAGR-------------- 145

  Fly   191 FVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
                    ||.|..|:..|.|||||||.||.||.|.||||::.:|.|||||||:||||||||.|:
 Frog   146 --------RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK 202

  Fly   256 QTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNN 310
                    |:|||.......:.:.....|..      ...|..::....:|..:|
 Frog   203 --------ENNKDKFPSSKCEQEELEKQKME------RGQDTEEALDGQKGEKSN 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	37/55 (67%)
hoxb8	XP_002938067.1	Homeodomain	146..202	CDD:459649	37/55 (67%)