Protein Alignment pb and nkx6-3

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002932753.1
• Gene: nkx6-3 / 100489301
• XenbaseID: XB-GENE-478609
• Length: 255
• Species: Xenopus tropicalis
• Alignment Length: 193
• Identity: 55/193 - (28%)
• Similarity: 82/193 - (42%)
• Gaps: 43/193 - (22%)

  Fly   122 GTPVGSGAIGGVGVNVNVNVGVGVGYPV--GVVPQTPDGMDSVPEYPWMKEKKTSRKSSN-NNNQ 183
            |||.|...|....:..: :.|:..|||.  |.      |..|||...:.::.....||.. ..||
 Frog    46 GTPHGISDILSRPLPAS-HSGMFPGYPTVQGY------GSSSVPGSCYGEQGSILTKSGTPYTNQ 103

  Fly   184 --------------GDNSITEFVPENGLPRR--LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIA 232
                          |:.:::......|..|:  .|..:|..|:..|||.|...|||..|.|..:|
 Frog   104 SRGCWTDIEQDWRGGNRALSSVSNTEGSSRKKHTRPTFTGHQIFALEKTFEQTKYLAGPERARLA 168

  Fly   233 ASLDLTERQVKVWFQNRRMKHKRQT-----------------LSKTDDEDNKDSLKGDDDQSD 278
            .||.::|.||||||||||.|.::::                 |:.:::||::.|...|.|..|
 Frog   169 FSLGMSESQVKVWFQNRRTKWRKKSAVETPGLPSLSTRGPGDLTPSENEDDEYSKPLDPDSDD 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	28/57 (49%)
nkx6-3	XP_002932753.1	Homeodomain	133..191	CDD:459649	28/57 (49%)