DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and hmx2

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_002937849.1 Gene:hmx2 / 100486800 XenbaseID:XB-GENE-480085 Length:252 Species:Xenopus tropicalis


Alignment Length:105 Identity:34/105 - (32%)
Similarity:51/105 - (48%) Gaps:18/105 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 MDSVPEYPWMKEKKT-------SRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKE 216
            |.|..:..:.:||.:       .|.....:..|::.           ::.||.::.:|:.:||..
 Frog    94 MPSPSQQDYTEEKDSHYPQSLGDRHKDGGDKMGNSK-----------KKTRTVFSRSQVYQLEST 147

  Fly   217 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 256
            |...:||....|..:|:||.|||.|||.||||||.|.|||
 Frog   148 FDMKRYLSSSERACLASSLQLTETQVKTWFQNRRNKWKRQ 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 25/55 (45%)
hmx2XP_002937849.1 Homeodomain 130..186 CDD:459649 25/55 (45%)

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