Protein Alignment pb and hoxc4

DIOPT Version :9

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002936684.1
• Gene: hoxc4 / 100486039
• XenbaseID: XB-GENE-967141
• Length: 297
• Species: Xenopus tropicalis
• Alignment Length: 206
• Identity: 69/206 - (33%)
• Similarity: 89/206 - (43%)
• Gaps: 92/206 - (44%)

  Fly   165 YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRI 229
            |||||:...|  |.|.|..|           |.|:|.|||||..|:||||||||:|:||.|.|||
 Frog   173 YPWMKKIHVS--SVNPNYTG-----------GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRI 224

  Fly   230 EIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPS 294
            |||.||.|:|||:|:||||||||.|:         |::
 Frog   225 EIAHSLCLSERQIKIWFQNRRMKWKK---------DHR--------------------------- 253

  Fly   295 DDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVASS 359
                                          .||:.:.:..|||       ::||:|      |||
 Frog   254 ------------------------------LPNTKVRSNASSN-------ASSNII------ASS 275

  Fly   360 VSLDEDIEESS 370
            .:..||:.:||
 Frog   276 AAASEDLSQSS 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	COG5576	168..274	CDD:227863	51/105 (49%)
		Homeobox	202..254	CDD:278475	39/51 (76%)
hoxc4	XP_002936684.1	Homeobox	196..250	CDD:365835	39/53 (74%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	2.000