Protein Alignment pb and hoxc4

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002936684.1
• Gene: hoxc4 / 100486039
• XenbaseID: XB-GENE-967141
• Length: 297
• Species: Xenopus tropicalis
• Alignment Length: 206
• Identity: 69/206 - (33%)
• Similarity: 89/206 - (43%)
• Gaps: 92/206 - (44%)

  Fly   165 YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRI 229
            |||||:...|  |.|.|..|           |.|:|.|||||..|:||||||||:|:||.|.|||
 Frog   173 YPWMKKIHVS--SVNPNYTG-----------GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRI 224

  Fly   230 EIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPS 294
            |||.||.|:|||:|:||||||||.|:         |::
 Frog   225 EIAHSLCLSERQIKIWFQNRRMKWKK---------DHR--------------------------- 253

  Fly   295 DDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVASS 359
                                          .||:.:.:..|||       ::||:|      |||
 Frog   254 ------------------------------LPNTKVRSNASSN-------ASSNII------ASS 275

  Fly   360 VSLDEDIEESS 370
            .:..||:.:||
 Frog   276 AAASEDLSQSS 286

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	40/55 (73%)
hoxc4	XP_002936684.1	Homeodomain	194..250	CDD:459649	40/55 (73%)