DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and gbx2

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_002932046.1 Gene:gbx2 / 100485559 XenbaseID:XB-GENE-855771 Length:340 Species:Xenopus tropicalis


Alignment Length:183 Identity:62/183 - (33%)
Similarity:85/183 - (46%) Gaps:18/183 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 SEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMD 160
            |:||..:.:.....::.......|...:.|..|.:.|.|...:.....|.|.....:      ||
 Frog   137 SDGGQSDGEDGNKTYITKEGTLLPFSASEVSLGPVRGQGKEESGKEAEGKGKEDSYL------MD 195

  Fly   161 SVPEY---------PWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKE 216
            |..:|         ...||..|..:|..|:|..:||.|....:|   ||.|||:|:.||||||||
 Frog   196 SDLDYSSDDNISCQTAHKEDDTPEESPPNSNPSNNSNTSSTGKN---RRRRTAFTSEQLLELEKE 257

  Fly   217 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDS 269
            ||..|||....|.:||.:|.|:|.|||:||||||.|.||......:.:..:.|
 Frog   258 FHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNANSKTGEPS 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 35/55 (64%)
gbx2XP_002932046.1 Homeodomain 240..296 CDD:459649 35/55 (64%)

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