Protein Alignment pb and hoxa10

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002933440.2
• Gene: hoxa10 / 100485262
• XenbaseID: XB-GENE-478888
• Length: 359
• Species: Xenopus tropicalis
• Alignment Length: 335
• Identity: 96/335 - (28%)
• Similarity: 123/335 - (36%)
• Gaps: 111/335 - (33%)

  Fly    19 SESP-LNPLQVQTGQTSLPVGGCG-GAGVVGGVGGV-----GVSVGQPGIG--------QQGVPP 68
            |||| .|...|.    ||..||.| ..|...|.||.     .|:.|....|        .:|:||
 Frog    21 SESPAANSFLVD----SLISGGRGEPGGYYPGSGGYLPQASEVTYGLQSCGLFPILGKRNEGIPP 81

  Fly    69 VPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMA----EFLNHLSPES----------- 118
                  .|...|...........|:.|.....:....|.|    .|..::..||
 Frog    82 ------NNPTPPTSQSYGPGMEVWLDAPRSCRVGQSESQAATSCSFTQNIKEESSYCLYDSDKCP 140

  Fly   119 -----------PKIGTP------VGSGAIGGVGVNVNVNVGVGVGYPVG--VVPQ---------- 154
                       |::.:.      |||..|.|. ..::...|...||..|  |.||
 Frog   141 KGSAATELPGFPRVNSEPSPEQNVGSVPIPGY-FRLSQAYGSSKGYGNGHIVAPQFPAQSQVRFD 204

  Fly   155 TPDGMDSVP---------EYPWMK---------EKKTSRKSSN---------------------N 180
            .|..:.|||         |.|..|         |::|...||.                     .
 Frog   205 APASLSSVPTENARKESAESPVSKLPVGSQQRREEETLSSSSAAEESSPAPSDSSKHSPGKELVG 269

  Fly   181 NNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVW 245
            |.:|||:.|....::|  |:.|..||..|.|||||||.||.||.|.||:||:.|:.|::||||:|
 Frog   270 NAKGDNAATWLTAKSG--RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLSDRQVKIW 332

  Fly   246 FQNRRMKHKR 255
            |||||||.|:
 Frog   333 FQNRRMKLKK 342

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	35/55 (64%)
hoxa10	XP_002933440.2	Homeodomain	286..342	CDD:459649	35/55 (64%)