Protein Alignment pb and Hoxb2

DIOPT Version :9

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002727852.1
• Gene: Hoxb2 / 100361765
• RGDID: 2319509
• Length: 355
• Species: Rattus norvegicus
• Alignment Length: 342
• Identity: 121/342 - (35%)
• Similarity: 160/342 - (46%)
• Gaps: 70/342 - (20%)

  Fly    97 EGGFINSQPSMAEFLNH------------------LSPESPKI-----GTPVGSGAIGGVGVNVN 138
            |.||||||||:||.|..                  :.|..|.:     ...:|:..:...|....
  Rat     8 EIGFINSQPSLAECLTSFPAVLETFQTSSIKESTLIPPPPPPLEQTFPSLQLGASTLQRPGSQKP 72

  Fly   139 VNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNN-------------NNQGDNSITE 190
            ...|..: .|...:|..|    ..||:|||||||:::|.|.:             :..|..|...
  Rat    73 AGDGPAL-RPPPPLPVAP----PAPEFPWMKEKKSAKKPSQSAATPSPAASSVRASGVGSPSDGP 132

  Fly   191 FVPENG--LPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 253
            .:||:|  ..||||||||||||||||||||||||||||||:||||.|||||||||||||||||||
  Rat   133 GLPESGGSGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKH 197

  Fly   254 KRQTLSKTDDEDNKDSLKGDDDQ---------SDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNN 309
            ||||..:...:.....|...||.         |..:..|.:..:.|.||:    ::....||...
  Rat   198 KRQTQHREPPDGEPGGLSAQDDAGEPAEEPTVSPGDVASHRLREACFLPA----EAAQGPRGAPP 258

  Fly   310 NTPSATNNNPSAGNLTPNSSL--ETGISSNLM---------GSTTVSASNVISADSSVASSVSLD 363
            ..|.||... |.|..:|..::  ..|:.|..:         .|..:...|..:|||.:..|..|.
  Rat   259 PLPPATALE-SVGASSPGCTMLRAGGLQSEPLPEDACPERQDSPFLPDLNFFAADSCLPMSGGLS 322

  Fly   364 EDIEES--SPIKVKKKD 378
            ..::.|  ||:...:::
  Rat   323 PSLQGSLDSPVPFSEEE 339

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	COG5576	168..274	CDD:227863	70/120 (58%)
		Homeobox	202..254	CDD:278475	49/51 (96%)
Hoxb2	XP_002727852.1	Homeobox	146..198	CDD:278475	49/51 (96%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166352770
Domainoid	1	1.000	117	1.000	Domainoid score	I5764
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	1	1.000	-	-		otm44922
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	LDO	PTHR45664
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X2356
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
	9	8.800