Protein Alignment pb and hoxb2

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_012808332.1
• Gene: hoxb2 / 100038155
• XenbaseID: XB-GENE-478525
• Length: 340
• Species: Xenopus tropicalis
• Alignment Length: 348
• Identity: 63/348 - (18%)
• Similarity: 121/348 - (34%)
• Gaps: 91/348 - (26%)

  Fly     3 MASPRLSVPNELTMGDYYRSTGSSDMRGRSTNNLLDYTSASSSTNGSAGGPEKLKLHRATLPSIT 67
            ||.|.:|:..|.:....:.:|....:      |:...::|:|.|....|.|    ||:....|:.
 Frog   624 MAPPSVSIQPEASSPWDWNTTSQGGL------NVGSRSAATSPTASPHGTP----LHQPKPQSLD 678

  Fly    68 T-----TTSENNSDDAKSLSPEQSPTDHHFLCPDDNGGVYGAGPAHSAIKKSSVRRAASFTFSPK 127
            .     ....|.:..:...|...:||.    |    ||.:...|.|:.  ..|.:....:::...
 Frog   679 PFADIGALGANLAGGSSFASKPTTPTG----C----GGGFPPSPQHTG--GGSWQSGTGYSWQQT 733

  Fly   128 HSSSKTNLRQLNGREEDKEKKRFLGPISRTLSYLRSKMDLALSTSSLYPSRDDVRQWEISFESLL 192
            .|.|:.|:..                     |..:||.:..:|.|.....::|
 Frog   734 QSKSQQNIPH---------------------SSPQSKPNYNISFSGTGSGQND------------ 765

  Fly   193 NNKFGCALFRQFLKKEFSDENMDFWLECEEFKKMKDGKKSTTQKAIEIYSEFVAEHSPKEVNL-- 255
            ..|..|.:   ..|::|..:|.:..|..:.|...|:.|...|...:. ..|...|..|:::.|
 Frog   766 RGKNACNV---DTKQKFCADNFEDLLSSQGFNAHKERKGPRTIAEMR-KEEMSKEMDPEKLKLLD 826

  Fly   256 -----DSDTRAATKA------AVEAGCKPDTFA--LAQSRVEQLMSK------------DSYRRF 295
                 :.:.||....      |.|...||.:.|  :...:|:::..|            ..|.::
 Frog   827 WIEGKERNIRALLSTMHTVLWAGETKWKPVSMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQY 891

  Fly   296 LRDRLFLDLLESY-EITDKEDKP 317
            .: .:|::|.::: |..::..||
 Frog   892 AK-MIFMELNDAWSEFENQGQKP 913

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	11/55 (20%)
hoxb2	XP_012808332.1	Homeodomain	134..190	CDD:459649