Protein Alignment pb and hoxa2

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_004915456.1
• Gene: hoxa2 / 100038099
• XenbaseID: XB-GENE-488087
• Length: 373
• Species: Xenopus tropicalis
• Alignment Length: 369
• Identity: 131/369 - (35%)
• Similarity: 160/369 - (43%)
• Gaps: 124/369 - (33%)

  Fly    97 EGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVN-------------VNVNVGV----- 143
            |.||||||||:||.|...    |.:|....|.:|....::             .::|.|.
 Frog     8 EIGFINSQPSLAECLTSF----PPVGDTFQSSSIKSSALSHSTLIPPPFEQTIPSLNPGSHPRHS 68

  Fly   144 -------GVG---YPVGVVPQTPDGMDSVPEYPWMKEKKTSRKS--------------------- 177
                   |.|   .|.|.:|         ||||||||||.|:|:
 Frog    69 RPKHSPNGHGDSPVPAGSLP---------PEYPWMKEKKASKKAPIAAATAAAAASAAPATTACL 124

  Fly   178 SNNN--NQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTER 240
            |:..  ...|||       :|..||||||||||||||||||||||||||||||:||||.||||||
 Frog   125 SHKEIIEIQDNS-------SGGSRRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTER 182

  Fly   241 QVKVWFQNRRMKHKRQTLSKTDDE-DNK-----DSLKGDDDQSDS-------------------- 279
            |||||||||||||||||..|.:.. |.|     ||.||::::..|
 Frog   183 QVKVWFQNRRMKHKRQTQCKENQNGDGKFKHLDDSEKGEEEKEKSLFEQALNSVSGALLERDSYS 247

  Fly   280 ---------NSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATN-------------NNPSAG 322
                     .|::..:......|...:.:|..|.|.....:|:|.|             ||.|..
 Frog   248 FQQNALAQQQSHNSHNGDSQSFPVSPLSNSEKNLRHFQQQSPTAQNCLSTIAQDCAAGLNNDSPE 312

  Fly   323 NLTPNSSLETGISSN---LMGSTTVSASNVISADSSVASSVSLD 363
            .|...|..:..:.|:   |..|.|||.|...|.||.|  .:|.|
 Frog   313 ALDVASLTDFNVFSSDSCLQLSDTVSPSLPGSLDSPV--DISAD 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	53/55 (96%)
hoxa2	XP_004915456.1	Homeodomain	141..197	CDD:459649	53/55 (96%)