Protein Alignment pb and nkx6-2

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_002937836.1
• Gene: nkx6-2 / 100038084
• XenbaseID: XB-GENE-484527
• Length: 281
• Species: Xenopus tropicalis
• Alignment Length: 255
• Identity: 65/255 - (25%)
• Similarity: 96/255 - (37%)
• Gaps: 61/255 - (23%)

  Fly   105 PSM-AEFLNHLSPESPKIGTPVG--------SGAIGGVGVNV-----NVN---VGVGVGYPVGVV 152
            ||. |..|:.||.:.| :|||.|        .||..|...|:     .:|   ...|:.:....|
 Frog    43 PSFKAPGLSSLSAQIP-LGTPHGISDILSRPLGATLGSSANLLSSLPRINGLATSTGMYFNPAAV 106

  Fly   153 PQTPDGMDSVP------------EYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAY 205
            .:.|..:..:|            ..||...:......:.          ..:.::|..:..|..:
 Frog   107 SRYPKPLAELPGRAPIFWPGVMQGSPWRDPRLGCPSQAG----------MVLDKDGKKKHSRPTF 161

  Fly   206 TNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ------TLSKTDDE 264
            :..|:..|||.|...|||..|.|..:|.||.:||.||||||||||.|.:::      |..|..|.
 Frog   162 SGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKRHAAEMATAKKKHDS 226

  Fly   265 DNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSR------GHNNNTPSATNNN 318
            :.:...:..:::.|...|.         |.|...|....||      ..|.|..|..:||
 Frog   227 ETEKMKESSENEEDDEYNK---------PLDPNSDDEKISRLLKKHKSTNLNLLSPCSNN 277

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
nkx6-2	XP_002937836.1	Homeodomain	153..211	CDD:459649	27/57 (47%)