Protein Alignment pb and not

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001164669.1
• Gene: not / 100038059
• XenbaseID: XB-GENE-478518
• Length: 236
• Species: Xenopus tropicalis
• Alignment Length: 228
• Identity: 60/228 - (26%)
• Similarity: 96/228 - (42%)
• Gaps: 54/228 - (23%)

  Fly    98 GGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNV----------------GVGVG 146
            |..:...|:|:     :|.|.|:  ||..|..|..:....:..|                .|...
 Frog    11 GHHLAEHPAMS-----ISSELPR--TPKASFNIDSILSRADRPVPKVSMEMPSWQPPSPPSVPYR 68

  Fly   147 YPVGVVPQTPDGM-DSVPEYPWMKEKKTSRKSSNNNNQGDNSITE------FVPENGL------- 197
            |..|::|..|..: .....||.|.:::..|.........|.:..|      ..|...:
 Frog    69 YSYGMMPYPPVWLIKPTVGYPSMAQQQPMRMPRGECPCPDPACKERGLLYSHCPNGSMNPLSWRT 133

  Fly   198 ----PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTL 258
                .:|:||.:|..||..|||||...:|:....|:::|::|:|||.||||||||||:|.::|:|
 Frog   134 GPCKMKRIRTVFTPEQLERLEKEFLKQQYMVGTERVDLASTLNLTETQVKVWFQNRRIKWRKQSL 198

  Fly   259 SK------------TDDEDN-KDSLKGDDDQSD 278
            .:            .|..|: .||.:.::|:.|
 Frog   199 EQKKAKLSQFGVIPADSSDHTDDSRETEEDEDD 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	29/55 (53%)
not	NP_001164669.1	Homeodomain	139..195	CDD:459649	29/55 (53%)