Protein Alignment pb and hoxd12a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001119958.1
• Gene: hoxd12a / 100006598
• ZFINID: ZDB-GENE-990415-118
• Length: 277
• Species: Danio rerio
• Alignment Length: 112
• Identity: 40/112 - (35%)
• Similarity: 55/112 - (49%)
• Gaps: 34/112 - (30%)

  Fly   178 SNNNNQGDNSITEFVPE--------------------------NGLP--------RRLRTAYTNT 208
            |:.:.|..:||..|.|.                          ||||        |:.|..||..
Zfish   155 SDASKQSVSSIAPFQPSLSAQNIRPAFTDGTLNFSNDPSAIDTNGLPWCPSQVRSRKKRKPYTKP 219

  Fly   209 QLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
            ||.|||.||..|:::.|.:|.|::..|:|:::|||:||||||||.||
Zfish   220 QLTELENEFMMNEFINRQKRKELSDRLELSDQQVKIWFQNRRMKKKR 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	28/55 (51%)
hoxd12a	NP_001119958.1	Homeodomain	210..266	CDD:459649	28/55 (51%)