Protein Alignment pb and barhl2

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_991303.1
• Gene: barhl2 / 100001699
• ZFINID: ZDB-GENE-050913-153
• Length: 364
• Species: Danio rerio
• Alignment Length: 305
• Identity: 72/305 - (23%)
• Similarity: 114/305 - (37%)
• Gaps: 106/305 - (34%)

  Fly     8 LDTTSMGTQI-----------------KSESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVS 55
            |.||:.||.:                 :|::..:|              |.....||......:|
Zfish    15 LSTTNSGTSVLMNGDFRLGDSSRTADFRSQATPSP--------------CSEIDTVGTAPSSPIS 65

  Fly    56 V----GQPGIGQQG-----------------VPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGG 99
            |    .:|.:.|..                 :.|.|.:|    ....|..|:|.:::.:....|
Zfish    66 VTMEHPEPHLVQDSLQHHHHHHHHSQAQSLQLSPQPHLL----GQAGCAPRTATSSFLIKDILG- 125

  Fly   100 FINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQT-----PDGM 159
              :|:|..|     .:|.|..:.:|..|                         |:|     |||:
Zfish   126 --DSKPLAA-----CAPYSTSVPSPHHS-------------------------PKTESGTAPDGI 158

  Fly   160 DSVPEYPWMKEKKTSRKS--------SNNNNQGDNSIT---EFVP-ENGLPRRLRTAYTNTQLLE 212
            ....|....:.|...|..        :....:||..|:   :..| .:..||:.|||:::.||.:
Zfish   159 RPKLEQDENRSKLDKRDDIQSDLKCLNGTKEEGDREISSSRDSPPVRSKKPRKARTAFSDHQLNQ 223

  Fly   213 LEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 257
            ||:.|...|||....|:::||:|:||:.|||.|:||||.|.||||
Zfish   224 LERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQT 268

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
barhl2	NP_991303.1	Homeodomain	210..266	CDD:459649	27/55 (49%)