DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mcpt8l2 and CG18420

DIOPT Version :10

Sequence 1:NP_001128482.1 Gene:Mcpt8l2 / 408240 RGDID:1302938 Length:248 Species:Rattus norvegicus
Sequence 2:NP_995715.1 Gene:CG18420 / 2768924 FlyBaseID:FBgn0028866 Length:299 Species:Drosophila melanogaster


Alignment Length:253 Identity:73/253 - (28%)
Similarity:114/253 - (45%) Gaps:56/253 - (22%)


- Green bases have known domain annotations that are detailed below.


  Rat    18 GGEIIWGTESKPHSRPYMAFIKFYDSNSEPQSCGGFLVAKDIVMTAAHC--NGRNIKVTLGAHNI 80
            |..|:.|..:..:|.|:|||:   .::|....|||.|:::.:|:|||||  ....|.|.||.:| 
  Fly    40 GPRIVNGKVAVRNSSPWMAFL---HTSSNQFICGGTLISRRLVLTAAHCFIPNTTIVVRLGEYN- 100

  Rat    81 RK----RENTQVISVVKAKPHENYDKHSRFNDIMLLKLERKAQLNGAVKTIALPRSQDW---VKP 138
            ||    ||..||....:   |..||.::..|||.||:|.........::.|.:.....|   :..
  Fly   101 RKLKGYREEHQVNRTFQ---HRFYDPNTHANDIALLRLVSNVVYKANIRPICIMWDASWKHHIDS 162

  Rat   139 GQVCTVAGWGHLANCTSSNTLQEVNLEVQKGQKC--------QDMSKDYNDSIQLCVGNPKEGKA 195
            .:|.|..|||...:...|:.|:.:::..|..:.|        |..:.::|.:  ||:|       
  Fly   163 IKVLTGTGWGRTESMHDSSELRTLDISRQPSKMCAFGSVLSNQFCAGNWNSN--LCIG------- 218

  Rat   196 TSERDSGGP------------FVCDGVAQGIVS-RCLCTGTLPRVFTRISSFIPWIQK 240
                |:|||            ||..|:|  |.: ||    ..|.|||.:.|.|.:|::
  Fly   219 ----DTGGPVGAMVRYRNAFRFVQVGIA--ITNKRC----QRPSVFTDVMSHIEFIRR 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Mcpt8l2NP_001128482.1 Tryp_SPc 21..241 CDD:238113 72/250 (29%)
CG18420NP_995715.1 Tryp_SPc 42..264 CDD:214473 71/247 (29%)

Return to query results.
Submit another query.