DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ccp84Af and LOC3290141

DIOPT Version :10

Sequence 1:NP_649678.1 Gene:Ccp84Af / 40820 FlyBaseID:FBgn0004778 Length:151 Species:Drosophila melanogaster
Sequence 2:XP_556986.2 Gene:LOC3290141 / 3290141 VectorBaseID:AGAMI1_005909 Length:201 Species:Anopheles gambiae


Alignment Length:162 Identity:55/162 - (33%)
Similarity:77/162 - (47%) Gaps:23/162 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FKFFAVLALISAAS---AGVLPVQQVYHAAPAVATYAQA----PVA-VAHAQPVLTKATE----E 55
            ||..|.|||:|.|:   .|    ::.:|.......|:.|    ||: .||...|..|...    :
Mosquito     5 FKTVACLALLSVAACEYGG----EEEHHGHHHSVGYSYAKFSGPVSGPAHEIHVEDKHGHGHQID 65

  Fly    56 YDPHPQYKFAYDVQDSLSGDSKSQVEERDGDVVHGEYSLIDSDGYKRIVQYTSDPVNGFNA--VV 118
            |...|.|.|.|.|:|..|..|:|:.|.|..|.:||||||...||..|.|:|:|:..:||.|  ::
Mosquito    66 YVAKPDYVFEYGVEDPKSKVSQSRKEHRHEDELHGEYSLHQPDGKLRTVKYSSNKHSGFQAEVLI 130

  Fly   119 NRVPLDHVKTVVKTVAPVAVAAAPIPVAYHQH 150
            :..||..     :.:|.:|..||......|||
Mosquito   131 DGKPLHE-----EELAKLAHEAASQSAHQHQH 157

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccp84AfNP_649678.1 Chitin_bind_4 62..114 CDD:459790 23/51 (45%)
LOC3290141XP_556986.2 Chitin_bind_4 72..124 CDD:459790 23/51 (45%)

Return to query results.
Submit another query.