DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edg84A and CG13044

DIOPT Version :9

Sequence 1:NP_524247.1 Gene:Edg84A / 40818 FlyBaseID:FBgn0000552 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_648867.1 Gene:CG13044 / 39795 FlyBaseID:FBgn0036599 Length:155 Species:Drosophila melanogaster


Alignment Length:167 Identity:42/167 - (25%)
Similarity:66/167 - (39%) Gaps:25/167 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFVTLIGLAQAGPLPAKSSGSEDTYDSHPQYSFNYDVQDPETGDVKSQSESRDGDVVHGQYSVND 71
            |||....||.|...|...:.:...|.:....:.   ||:|....|.:..:|....|.|  .|:..
  Fly     4 LFVLAALLAVAAAKPGHLAAAPLVYSAPATTTV---VQEPVLAKVGAVVKSVPTAVSH--QSLTQ 63

  Fly    72 ADGYRRTVDYTADDVRGFNAVVRREPLSSAAVVVKPQATAVVPKVQLKPLKKLPALKPLSQASAV 136
            ........|..|..|:  ...|...|:.:||.:||..|.....             .||:.::.|
  Fly    64 VHSTPVVEDVVAPVVK--TTAVHSAPVLAAAPIVKTLAPVAYS-------------APLAYSAPV 113

  Fly   137 VHRSF-APVVHHAPVTH--VVHHAAPAHSFVSHHVPV 170
            .:.|: ||:.:.|||.:  .:.:||||.  :.||.|:
  Fly   114 AYSSYAAPLTYSAPVAYSAPLSYAAPAP--LLHHAPL 148

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edg84ANP_524247.1 Chitin_bind_4 37..89 CDD:278791 11/51 (22%)
CG13044NP_648867.1 Retinin_C 36..93 CDD:282395 14/63 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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