DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edg84A and Lcp4

DIOPT Version :9

Sequence 1:NP_524247.1 Gene:Edg84A / 40818 FlyBaseID:FBgn0000552 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_001260804.1 Gene:Lcp4 / 35820 FlyBaseID:FBgn0002535 Length:112 Species:Drosophila melanogaster


Alignment Length:73 Identity:18/73 - (24%)
Similarity:28/73 - (38%) Gaps:13/73 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 SRDGDV---VHGQYSVNDADGYRRTVDYTADDVRGFNAVVRREPLSSAAVVVKPQATAV---VPK 115
            |..|||   :.|.:.....:|....|.|.||: .|:      :|.|.......|...|:   :..
  Fly    47 SATGDVHGNIDGVFEWVSPEGEHVRVSYKADE-NGY------QPQSDLLPTPPPIPEAILKAIAY 104

  Fly   116 VQLKPLKK 123
            :|..|.|:
  Fly   105 IQAHPSKE 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edg84ANP_524247.1 Chitin_bind_4 37..89 CDD:278791 10/34 (29%)
Lcp4NP_001260804.1 Chitin_bind_4 40..81 CDD:278791 10/34 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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