DRSC/TRiP Functional Genomics Resources

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Protein Alignment Edg84A and Cpr12A

DIOPT Version :9

Sequence 1:NP_524247.1 Gene:Edg84A / 40818 FlyBaseID:FBgn0000552 Length:188 Species:Drosophila melanogaster
Sequence 2:NP_572896.1 Gene:Cpr12A / 32309 FlyBaseID:FBgn0030494 Length:173 Species:Drosophila melanogaster


Alignment Length:142 Identity:39/142 - (27%)
Similarity:58/142 - (40%) Gaps:37/142 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LFVTLIGLAQAGPLPAKSSGSEDTYDS-HP--QYSFNYDVQDP----ETG------DVKSQSESR 58
            |..|||. ||.....|.|:...|.:|: :|  .|.:.:::.|.    |.|      |||:.    
  Fly    14 LSATLIS-AQQIKESAPSARLLDRFDNRYPDGSYEYRFELDDGTARYERGYFVKINDVKTL---- 73

  Fly    59 DGDVVHGQYSVNDADGYRRTVDYTADDVRGFNAVVRREPLSSAAVVVKPQATAVVPKVQLKPLKK 123
               :|.|.|:....||...||.|.||.. |:     |:..|     :.||....:|:     ..:
  Fly    74 ---MVVGYYAYRMTDGRYITVFYNADQF-GY-----RQNQS-----ITPQEYPNLPR-----SIE 119

  Fly   124 LPALKPLSQASA 135
            :|.:...|.|||
  Fly   120 VPMVSEASAASA 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edg84ANP_524247.1 Chitin_bind_4 37..89 CDD:278791 17/61 (28%)
Cpr12ANP_572896.1 Chitin_bind_4 46..100 CDD:278791 17/61 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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