DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Edg84A and CPR30

DIOPT Version :9

Sequence 1:NP_524247.1 Gene:Edg84A / 40818 FlyBaseID:FBgn0000552 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_316043.3 Gene:CPR30 / 1276673 VectorBaseID:AGAP006009 Length:101 Species:Anopheles gambiae


Alignment Length:77 Identity:22/77 - (28%)
Similarity:36/77 - (46%) Gaps:8/77 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 SSGSEDTYDSHPQYSFNYDVQDPETGDVKSQSESRDGD-----VVHGQYSVNDADGYRRTVDYTA 83
            |..:::..|.  .|.|.|:..|.:..:.|.:.:..:|.     .|.|.|...|::|.|..|||.|
Mosquito    27 SFNNDNNVDG--SYQFAYEQSDGQKREEKGELKPVEGSDEPALSVKGSYEYTDSNGQRYRVDYVA 89

  Fly    84 DDVRGFNAVVRR 95
            |: ||:...|.:
Mosquito    90 DE-RGYRPTVTK 100

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edg84ANP_524247.1 Chitin_bind_4 37..89 CDD:278791 18/56 (32%)
CPR30XP_316043.3 Chitin_bind_4 38..94 CDD:278791 18/56 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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