DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Edg84A and CPR13

DIOPT Version :9

Sequence 1:NP_524247.1 Gene:Edg84A / 40818 FlyBaseID:FBgn0000552 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_315457.1 Gene:CPR13 / 1276147 VectorBaseID:AGAP005454 Length:146 Species:Anopheles gambiae


Alignment Length:140 Identity:30/140 - (21%)
Similarity:50/140 - (35%) Gaps:40/140 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 LIGLAQAGPLPAKSSGSEDTYDSHPQ-------------YSFNYDVQDPETGDVKSQSESRDGDV 62
            |:....||||....|..::. |:|.|             |:::|:.    :..:.:..|......
Mosquito    11 LVATVAAGPLDRAYSHQQNP-DAHAQIVAYENVLKDDGHYNWSYET----SNGIAAHEEGLGAHN 70

  Fly    63 VHGQYSVNDADGYRRTVDYTADDVRGFNAVVRREPLSSAAVVVKPQATAV-----VPKVQLKPLK 122
            .:|.:|....||....|.|.||: .||                :||...:     .|:...|.|:
Mosquito    71 ANGAFSYTGPDGVLYRVVYVADE-NGF----------------QPQGDHLPTPPPTPEHVFKTLE 118

  Fly   123 KLPALKPLSQ 132
            ::.|..|..|
Mosquito   119 QIRANPPKDQ 128

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edg84ANP_524247.1 Chitin_bind_4 37..89 CDD:278791 11/51 (22%)
CPR13XP_315457.1 Chitin_bind_4 49..96 CDD:278791 11/51 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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