DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Edg84A and CPR116

DIOPT Version :9

Sequence 1:NP_524247.1 Gene:Edg84A / 40818 FlyBaseID:FBgn0000552 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_311664.4 Gene:CPR116 / 1272758 VectorBaseID:AGAP003378 Length:128 Species:Anopheles gambiae


Alignment Length:163 Identity:63/163 - (38%)
Similarity:81/163 - (49%) Gaps:47/163 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VKTALFVTLIGLAQA-----------GPLPAKSSGSEDTYDSHPQYSFNYDVQDPETGDVKSQSE 56
            :|..:||..:..|.|           .|..|.|:    .||..|||::.|:|||..|||.|||.|
Mosquito     1 MKFFVFVASLSAAVAMFGAHGAVVPVAPAVAVST----NYDPLPQYTYAYNVQDALTGDSKSQQE 61

  Fly    57 SRDGDVVHGQYSVNDADGYRRTVDYTADDVRGFNAVVRREPLSSAAVVVKPQATAVVPKVQLKPL 121
            :||||:|.|.||:.:.||..|||.||||.|.||||||:|.||              |||      
Mosquito    62 TRDGDIVRGSYSLVEPDGTLRTVFYTADPVNGFNAVVQRGPL--------------VPK------ 106

  Fly   122 KKLPALKPLSQASAVVHRSFAPVVHHAPVTHVV 154
                |:.|::...|::    ||    |||..|:
Mosquito   107 ----AVVPVAAGPAIL----AP----APVARVL 127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edg84ANP_524247.1 Chitin_bind_4 37..89 CDD:278791 30/51 (59%)
CPR116XP_311664.4 Chitin_bind_4 42..94 CDD:278791 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1544103at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.