DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Edg84A and CPR139

DIOPT Version :9

Sequence 1:NP_524247.1 Gene:Edg84A / 40818 FlyBaseID:FBgn0000552 Length:188 Species:Drosophila melanogaster
Sequence 2:XP_003435731.1 Gene:CPR139 / 11175635 VectorBaseID:AGAP013248 Length:466 Species:Anopheles gambiae


Alignment Length:178 Identity:40/178 - (22%)
Similarity:67/178 - (37%) Gaps:42/178 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 YSFNYDVQDPETGDVKSQSESR-DGDVVHGQYSVNDADGYRRTVDYTADDVRGFNA--VVRREPL 98
            |:|.|:::||:||:|:.:.|.: ....|.|.|.....||......:.||: .|:.|  .:||...
Mosquito    68 YAFGYEIEDPQTGNVQFRDEEKLKNGTVRGSYGYMQPDGSVIITSFVADE-GGYRAKTEIRRANG 131

  Fly    99 SSAAVVVKP------------------QATAVVPKV-----QLKPLKKLPALKPLSQASAVVHRS 140
            .:.|....|                  ||:.:.|.:     |.:.:...|...|:.....:..:.
Mosquito   132 QTVASFPAPAPSSAPGSQDRYFPAYDQQASTINPAIVAALQQQQHINLNPTYNPILDPGVIDPQY 196

  Fly   141 FAPVVHH------APVTHVVH--HAAPAHSFVSHHVPVLKTTVHHAHH 180
            .|.:|.|      :|...:|.  :..|...|.:|       ..|||.|
Mosquito   197 AAAIVGHIRDQQYSPGQGLVQYPYGIPTAPFPNH-------PQHHAQH 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Edg84ANP_524247.1 Chitin_bind_4 37..89 CDD:278791 16/52 (31%)
CPR139XP_003435731.1 Chitin_bind_4 68..120 CDD:278791 16/52 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.