DRSC/TRiP Functional Genomics Resources

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Protein Alignment lab and NKX6-2

DIOPT Version :10

Sequence 1:NP_476613.1 Gene:lab / 40817 FlyBaseID:FBgn0002522 Length:629 Species:Drosophila melanogaster
Sequence 2:NP_796374.2 Gene:NKX6-2 / 84504 HGNCID:19321 Length:277 Species:Homo sapiens


Alignment Length:246 Identity:62/246 - (25%)
Similarity:95/246 - (38%) Gaps:66/246 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   403 KPQAPKLPASGIASMHD----------YQMNGQLDM---CRGGGG---------GGSGVGNGPVG 445
            :|.|..|.::.:|::|:          |.:.|....   ..||.|         |.|.:...|||
Human     5 RPGAFVLSSAPLAALHNMAEMKTSLFPYALQGPAGFKAPALGGLGAQLPLGTPHGISDILGRPVG 69

  Fly   446 VGG----NGSPGIGGVLSVQNSLIMANSAAAAGSAHPNGMG----------VGLGSGSGLSSCSL 496
            ..|    .|.|.:.|:.|  ::.:....|||....:|..:.          .|:..|:......|
Human    70 AAGGGLLGGLPRLNGLAS--SAGVYFGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRL 132

  Fly   497 SSNTNNSG-----------RTNFTNKQLTELEKEFHFNRYLTRARRIEIANTLQLNETQVKIWFQ 550
            :......|           |..|:.:|:..|||.|...:||....|..:|.:|.:.|:|||:|||
Human   133 AGPAPAGGVLDKDGKKKHSRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQ 197

  Fly   551 NRRMKQKKRVKEGLIPADILTQHSTSVISEKPPQQQQPQPPELQLKSQGSD 601
            |||.|.:||             |:..:.|.|..|....:    :||..|||
Human   198 NRRTKWRKR-------------HAVEMASAKKKQDSDAE----KLKVGGSD 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
labNP_476613.1 Homeodomain 505..558 CDD:459649 23/52 (44%)
NKX6-2NP_796374.2 Repressor domain. /evidence=ECO:0000250|UniProtKB:D3Z4R4 89..142 8/52 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 132..155 3/22 (14%)
Homeodomain 147..205 CDD:459649 23/57 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 210..250 8/26 (31%)

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